grimmiges<p>PS If they only had a slightly invested <a href="https://ecoevo.social/tags/phylogeneticist" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>phylogeneticist</span></a> at hand; they easily could have learned a lot about the strengths and weaknesses of their data and preferred tree (a Bayesian MRC, by the way, is a summary tree of various competing topologies sampled in the MCMC chain, not a phylogenetic tree)</p><p>Here's a quick <a href="https://ecoevo.social/tags/NeighbourNet" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>NeighbourNet</span></a> based on their "toutes" matrix (inferred in less than a minute), annotated.<br>Overall <a href="https://ecoevo.social/tags/similarity" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>similarity</span></a> makes <a href="https://ecoevo.social/tags/clades" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>clades</span></a>, surprise, surprise.</p><p><a href="https://ecoevo.social/tags/PhyloNetworks" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>PhyloNetworks</span></a> <a href="https://ecoevo.social/tags/linguistics" class="mention hashtag" rel="nofollow noopener noreferrer" target="_blank">#<span>linguistics</span></a></p>